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Step-by-Step Guide to Changing MFA Methods for Entra ID

By Jake T on 4/8/25

Description: Need to change which multifactor authentication methods your users can set up? Read our step-by-step guide to learn how!

Intro

By default, Microsoft Entra will manage and enforce the multifactor authentication (MFA) methods available in new Microsoft tenants. This usually defaults to Microsoft Authenticator and a handful of other methods. For a number of reasons, though, Entra administrators may need to change or disable the MFA methods available to their users. In this step-by-step tutorial, we'll show you how!

Steps

1 . Start by signing in to the Microsoft Entra admin center at https://entra.microsoft.com

2. From the home page, find the Protection section in the left-hand navigation menu

3. Expand the Protection menu, and click on Authentication methods

Microsoft Entra admin center navigation menu

4. On the Authentication methods page, you'll see all of the MFA methods available and if they are enabled

Microsoft Entra admin center Authentication methods page

5. Click on the name of each method you want to configure. For this example, we'll disable the Passkey (FIDO2) method:

Passkey (FIDO2) settings in Microsoft Entra admin center

6. Ensure that any users who use Passkeys have additional MFA methods configured (e.g. Microsoft Authenticator, SMS, Email OTP). If not, you should give them advance notice and ask them to configure another method. Otherwise, they may be temporarily locked out you'll need to reset their MFA methods.

7. When ready, click I Acknowledge and click Save

Conclusion

That's it! Managing the authentication methods available for your users is easy in the Microsoft Entra admin center. For all of your Microsoft consulting and licensing needs, contact Cosmistack!

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Tags:

Entra ID MFAChange MFA Entra IDAzure AD MFAHow to change multifactor authentication methods in Entra IDMicrosoft Entra ID change MFA setup

Disclaimer: The information provided in this article is for educational and informational purposes only. The techniques, tools, and technologies discussed are intended to be used by individuals with a solid understanding of the subject matter. Readers are entirely responsible for any actions they take based on the content of this article. This blog and its authors do not assume any responsibility for any unintended outcomes, data loss, or issues that may arise from following the instructions or recommendations provided.

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